I'm relatively new to mark, so I hope this isn't too niave, but I am pretty stumped. In basic terms, I am wondering how to deal with animals that I am adding to a study site, and secondly, whether or not the timing of those additions matters.
The study involves measuring the densities of mice in forest fragments using a robust design--two days of trapping every three weeks--and on some of the fragments also adding more mice (captured elsewhere) every three weeks. It is the 'addition' sites that have me confused. It seems like these added mice will really alter the estimates of phi and p. Is there a way to fix these parameters at zero for the trapping sessions when they are not present?
Secondly is the matter of timing. For logistical reasons it would be best to add the mice the week before each set of two trapping sessions. But then these animals would be entering the model two-thirds of the way through the larger interval, and so I have no idea how to either code them or keep them from biasing survival estimates. Am I understanding the problem correctly? Do we need to make the additions at the same time as the trapping sessions?
I'd very much appreciate any help or points in the right direction. Thanks in advance!
-Jesse Brunner